Information for 13-CTCCTAGACT (Motif 38)

A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.2 +/- 26.3bp
Average Position of motif in Background55.4 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCCTAGACT-
---BCAGACWA
 A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCCTAGACT
CGTCTAGACA
 A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCCTAGACT-
---CCAGACAG
 A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGACT---
TTTCCTAGAAAGCA
 A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T A C G T A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCTAGACT---
---CCAGACRSVB
 A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCCTAGACT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTCCTAGACT--
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCCTAGACT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTAGACT-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGACT
GCTCGTAAAAA
 A C G T A G T C A C G T G T A C A G T C A C G T C G T A A C T G C G T A A G T C A G C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A