Information for 16-TAGAMWSCSWKRCYCT (Motif 28)

A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G C T A G A C T G A G T C G T A C C G T A A T C G A C T G A T C G C G T A A C T G A C G T A G T C A C G T C T G A
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 23.9bp
Average Position of motif in Background41.0 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TAGAMWSCSWKRCYCT
GGTTAGAGACCT-------
 A C G T A C G T A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TAGAMWSCSWKRCYCT
TACGAGACTCCTCTAAC--
 A C G T A C G T A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TAGAMWSCSWKRCYCT
BCAGACWA---------
 A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TAGAMWSCSWKRCYCT
CCAGACRSVB-------
 A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TAGAMWSCSWKRCYCT
CGTCTAGACA----------
 A C G T A C G T A C G T A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.46
Offset:-6
Orientation:forward strand
Alignment:------TAGAMWSCSWKRCYCT
TATCATTAGAACGCT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TAGAMWSCSWKRCYCT
---ACTACAATTCCC-
 A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:forward strand
Alignment:TAGAMWSCSWKRCYCT
TCGAAACCGAAACT--
 A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-TAGAMWSCSWKRCYCT
CCAGACAG---------
 A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-TAGAMWSCSWKRCYCT
TCAGNGAGCGTGAC---
 A C G T A G C T C G T A A C T G C G T A G T A C C G A T A T G C G T A C A T G C C G A T A C T G C T A G A G T C A G T C G T A C A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T