Information for 8-CTGGTAATTA (Motif 27)

A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A
Reverse Opposite:
A G C T T G C A G C T A G A C T G C A T G C T A G T A C G T A C C G T A A T C G
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.688
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.91%
Number of Background Sequences with motif2138.2
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets47.9 +/- 26.1bp
Average Position of motif in Background50.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2/MA0900.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--GNTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

MEOX1/MA0661.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--GNTAATTAGN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTGGTAATTA--
TGGAGGTAATTAAC
 A C G T A C G T A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--GNTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--NNTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

EMX2/MA0886.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--NCTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTGGTAATTA--
--AGTAATTAAC
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

EVX2/MA0888.1/Jaspar

Match Rank:8
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--NNTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

ESX1/MA0644.1/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--GNTAATTGGN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T C A T G A G C T C G A T C T G A C T G A C A G T A G C T C T A G C T A G A G C T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTGGTAATTA--
--NNTAATTANN
 A T G C G C A T C A T G C A T G C G A T C G T A C T G A C G A T A C G T T C G A A C G T A C G T
A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T