Information for 13-ATGAACACACAATAAA (Motif 22)

C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A
Reverse Opposite:
C G A T A G C T A G C T T C G A G A C T A G C T T A C G C G A T C A T G A C G T A C T G C G A T A C G T A T G C G C T A A C G T
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.715
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.3 +/- 20.6bp
Average Position of motif in Background49.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0073.1_Sox7_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGAACACACAATAAA------
AATAAAGAACAATAGAATTTCA
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGAACACACAATAAA
ATTTGCATACAATGG-
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGAACACACAATAAA
--AAAAAATCAATAAT
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGAACACACAATAAA---
---AAAAACCAATTAAGAA
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATGAACACACAATAAA--
---CTCACACAATGGCGC
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGAACACACAATAAA--
-TCACGGAACAATAGGTG
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:ATGAACACACAATAAA
-------GACAATGNN
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGAACACACAATAAA---
----ATAAACAATTAAACA
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATGAACACACAATAAA--
---AACAAACAACAAGAG
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATGAACACACAATAAA---
--TNNAGAACAATANATNN
 C G T A C G A T A T C G C G T A G C T A G T A C G T C A G T A C C G T A A T G C C T G A C T G A A C G T T C G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C