Information for 11-ATAAGATAGATKGTTA (Motif 20)

C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A G T A C G T C A C G T A C G A T G T A C C G A T C G T A A G C T A G T C C G A T A C G T C G T A C G A T
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.722
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 25.6bp
Average Position of motif in Background55.3 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.62
Offset:9
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA
---------ATTGTTA
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:ATAAGATAGATKGTTA--
---------ATTGTTTAN
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.57
Offset:9
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA
---------ATTGTT-
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA----
---GTATCTATTGTTCTTTA
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATAAGATAGATKGTTA------
TNNANNTCTATTGTTNTNNANN
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA----
---GGAAAAATTGTTAGGAA
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATAAGATAGATKGTTA----
----AANTTATTGTTCTNNA
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATAAGATAGATKGTTA----
---ANNTCTATTGTTCNNNA
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA--
--------ACTAGTTAAC
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATAAGATAGATKGTTA--------
-------TGATTGTTAACAGTTGG
 C G T A C G A T G T C A C G T A T C A G C T G A C G A T C G T A A C T G G C T A C G A T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G