Information for 10-AGGAARTACCCAGCCC (Motif 18)

C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
Reverse Opposite:
C A T G C T A G C T A G A T G C A C G T A T C G C A T G A C T G G A C T C G T A G A T C A G C T A C G T G T A C G T A C C G A T
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.6 +/- 22.9bp
Average Position of motif in Background38.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGAARTACCCAGCCC
-GGAAATCCCC-----
 C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGAARTACCCAGCCC
-GGAAANCCCC-----
 C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGAARTACCCAGCCC
-GGAAATTCCC-----
 C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGAARTACCCAGCCC----
---ANNTNCCCACCCANNAC
 C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGAARTACCCAGCCC
-GGAAATTCCC-----
 C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGAARTACCCAGCCC
ANCAGGAAGT---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGAARTACCCAGCCC
NDCAGGAARTNN-------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGAARTACCCAGCCC
NACAGGAAAT---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGAARTACCCAGCCC
AVCAGGAAGT---------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGAARTACCCAGCCC
ACAGGAAGTG--------
 A C G T A C G T C G T A A C T G A C T G C G T A C T G A C T A G C G A T C T G A G T A C G A T C A T G C G T C A T A C G A G T C A G T C G T A C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T