Information for 9-TKTTWCAACCMWG (Motif 10)

C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
Reverse Opposite:
A T G C G C T A A C T G T C A G T C A G A G C T C A G T T C A G C G A T C T G A C T G A T G C A C G T A
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.590
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.61%
Number of Background Sequences with motif296.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets50.9 +/- 22.7bp
Average Position of motif in Background51.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TKTTWCAACCMWG-
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TKTTWCAACCMWG
NTTTTACGACC---
 A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TKTTWCAACCMWG
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TKTTWCAACCMWG
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TKTTWCAACCMWG
-GCCACACCCA--
 C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TKTTWCAACCMWG
NTTTTACGACC---
 A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TKTTWCAACCMWG
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TKTTWCAACCMWG
TTTCACACCTN--
 C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TKTTWCAACCMWG
TTTCACACCT---
 C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TKTTWCAACCMWG
NTTTTACGACT---
 A C G T C G A T A C G T A G C T G A C T G C T A A G T C G T C A T C G A A G T C A G T C T G A C C G A T T A C G
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T A C G T