Information for 25-NAGCGCAGGACCA (Motif 43)

A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
Reverse Opposite:
A C G T A C T G A T C G A C G T A G T C A G T C A C G T A T C G T G A C A C T G A G T C A C G T T G C A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.731
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif87.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets65.2 +/- 22.7bp
Average Position of motif in Background48.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:NAGCGCAGGACCA
--GGGCGGGACC-
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:NAGCGCAGGACCA-
--GCGCATGCGCAG
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A A C G T
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:NAGCGCAGGACCA
-TGCGCAGGCGC-
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:NAGCGCAGGACCA-
--GCGCATGCGCAC
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:NAGCGCAGGACCA-
--SDGCAGGTGCNS
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:NAGCGCAGGACCA-
----CCAGGAACAG
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:NAGCGCAGGACCA----
-AGAGCGGGGTCAAGTA
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:NAGCGCAGGACCA
---NNCAGGTGCG
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:NAGCGCAGGACCA
---CACAGN----
 A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----NAGCGCAGGACCA
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G G T A C A C T G A T G C T C G A A C T G A C T G G T C A A T G C A G T C T G C A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T