Information for 23-GCGCTCTCGACCT (Motif 41)

A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C A C T G C G T A A C T G C G T A A C T G A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 29.6bp
Average Position of motif in Background54.1 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTCGACCT-
TGACCTTTTGACCTC
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGCTCTCGACCT
-NSCACTYVAV--
 A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGCTCTCGACCT---
---CNNTTGACCTTTG
 A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTCGACCT--
TGACCTTTTGACCTTT
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCTCTCGACCT-
ACCACTCTCGGTCAC
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTCTCGACCT-
TTGACCTTTTGACCTT
 A C G T A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTCGACCT-
NNAATTCTCGNTNAN
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCTCTCGACCT
-TGACCTTGACCT
 A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCGCTCTCGACCT
--GGTCCCGCCC-
 A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTCTCGACCT
BCNGGTTCTAGANCN
 A C G T A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T