Information for 19-AAKAATGGGGAAA (Motif 35)

C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
Reverse Opposite:
C A G T A G C T A C G T G T A C A G T C G T A C A G T C C G T A A G C T A G C T G T C A C G A T A C G T
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.762
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif160.1
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets48.1 +/- 27.1bp
Average Position of motif in Background49.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AAKAATGGGGAAA
-----TGGGGA--
 C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAKAATGGGGAAA
GAACAATGGN----
 A C G T C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAKAATGGGGAAA--
---AAAGRGGAAGTG
 C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAKAATGGGGAAA
--GGAGGGGGAA-
 C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAKAATGGGGAAA
-----AGAGGAA-
 C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAKAATGGGGAAA---
--TTAAGAGGAAGTTA
 C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAKAATGGGGAAA-
BAGTCATANTGAAAG
 A C G T C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAKAATGGGGAAA
VRAACAATGG-----
 A C G T A C G T C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAKAATGGGGAAA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAKAATGGGGAAA
GAACAATGG-----
 A C G T C G T A C G T A A C G T C T G A C T G A C G A T C T A G A C T G C T A G A C T G C G T A C T G A G T C A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T