Information for 9-TAATGCTGCTATAAAG (Motif 30)

G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
Reverse Opposite:
A T G C C G A T A C G T G A C T C G T A C A G T C G T A A T C G G T A C G T C A C T A G A G T C C T G A G C A T A C G T C T G A
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.9 +/- 21.9bp
Average Position of motif in Background57.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAATGCTGCTATAAAG---
--AGGACGCTGTAAAGGGA
 G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAATGCTGCTATAAAG---
--AAGACGCTGTAAAGCGA
 G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAATGCTGCTATAAAG---
--AAGACGCTGTAAAGCGA
 G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGCTGCTATAAAG
NNNATTAATCCGNTTNA----
 A C G T A C G T A C G T A C G T A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGCTGCTATAAAG
NNNATTAATCCGNTTNA----
 A C G T A C G T A C G T A C G T A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TAATGCTGCTATAAAG
TTAATCCT---------
 A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TAATGCTGCTATAAAG
TAATCCCN--------
 G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TAATGCTGCTATAAAG
CTAATATTGCTAAA---
 A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TAATGCTGCTATAAAG
CTAATATTGCTAAA---
 A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TAATGCTGCTATAAAG
NNTAATCCNGNCNN----
 A C G T A C G T G A C T G T C A C G T A A G C T C T A G A G T C A C G T A C T G A T G C C G A T G C T A C G A T C G T A G T C A C G T A A T C G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T A C G T A C G T A C G T