Information for 8-TCCATTTGTGTCTGGA (Motif 29)

C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G T A A C T G C T G A G T A C C G T A T A G C T C G A T C G A G T C A G C A T C A T G C T A G C G T A
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.679
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.7 +/- 16.3bp
Average Position of motif in Background45.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCCATTTGTGTCTGGA----
---NNTNNTGTCTGGNNTNG
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TCCATTTGTGTCTGGA
-------CTGTCTGG-
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCCATTTGTGTCTGGA
-----VBSYGTCTGG-
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TCCATTTGTGTCTGGA
-------TWGTCTGV-
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TCCATTTGTGTCTGGA--
--------TGTCTAGACG
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TCCATTTGTGTCTGGA--
--------GGTCTGGCAT
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCCATTTGTGTCTGGA
CATCCAGATGTTC-----
 A C G T A C G T C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTTGTGTCTGGA
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A C G T C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTGTGTCTGGA
NNNCCATTGTGTNAN--
 A C G T C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCCATTTGTGTCTGGA
GTCATGCHTGRCTGS-
 C G A T A G T C G A T C C G T A C A G T A G C T A C G T A T C G A C G T A C T G A G C T A G T C C G A T C T A G T C A G C T G A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T