Information for 8-GGCTTGTGTT (Motif 27)

C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T
Reverse Opposite:
C G T A C G T A T A G C C G T A G T A C C G T A T C G A A C T G T A G C G A T C
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.745
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif507.5
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets49.5 +/- 30.9bp
Average Position of motif in Background52.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTGTGTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCTTGTGTT-
--ATTGTTTAN
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTTGTGTT------
-NCNTTTGTTATTTNN
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCTTGTGTT--
--CCTTTGTTTT
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTTGTGTT-------
-NNTTTTGTTTTGATNT
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTGTGTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGCTTGTGTT--------
---CTTTGTTTACTTTTN
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTTGTGTT
----ATTGTT
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTTGTGTT-
-NCCATTGTTC
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T A C G T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCTTGTGTT
CCATTGTTNY
 C T A G A T C G T G A C A G C T C G A T C A T G A C G T A T C G C G A T C G A T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T