Information for 16-TCCTTSACCTAKG (Motif 25)

A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T C G T A A C T G A C T G C G A T A T G C C G T A C G T A A C T G C T A G C T G A
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 25.0bp
Average Position of motif in Background40.6 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTSACCTAKG
TGACCTTGACCT---
 A C G T A C G T A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTSACCTAKG
TGACCTTGACCT---
 A C G T A C G T A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCCTTSACCTAKG
CNNTTGACCTTTG
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCCTTSACCTAKG
---CTGACCTTTG
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCCTTSACCTAKG
----TGACCTYA-
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCCTTSACCTAKG---
NNNNTGACCTTTNNNN
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCCTTSACCTAKG
----TGACCT---
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCCTTSACCTAKG
---NTGACCTTGA
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCTTSACCTAKG---
NNNGTGACCTTTGNNN
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCCTTSACCTAKG
----TGACCYCT-
 A G C T A G T C A G T C A C G T A C G T A T C G C G T A A G T C A G T C A C G T G T C A A C G T A C T G
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T