Information for 5-TAATGAGCTA (Motif 22)

A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
Reverse Opposite:
C A G T C T G A C T A G T G A C C G A T T G A C C G T A A G C T A G C T C G T A
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.723
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif772.6
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets46.2 +/- 24.8bp
Average Position of motif in Background52.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAGCTA
NTAATGAGCT-
 A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAGCTA--
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

EVX1/MA0887.1/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
GNTAATTANN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
NNTAATTANN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
GNTAATTAGN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
NNTAATTAGN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:7
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
GNTAATTANN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
NNTAATTANN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCTA
NNTAATTAGN--
 A C G T A C G T A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TAATGAGCTA
TAATTAGN--
 A C G T C T G A T C G A A C G T A C T G C G T A A C T G A G T C G A C T G T C A
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T