Information for 13-GTCCCTTTGGCCC (Motif 19)

A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C T G A C T G A T C G G T C A A G T C
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.1 +/- 21.4bp
Average Position of motif in Background51.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC-
CCCCCTTGGGCCCC
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCCCTTTGGCCC-
TGACCTTTGCCCCA
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCCCTTTGGCCC-
--SCCTSAGGSCAW
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC--
TGACCTTTGCCCTAN
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC-
TGACCTTTGCCCTA
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC-
--GCCTCAGGGCAT
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCTTTGGCCC-
TTGACCTTTTGACCTT
 A C G T A C G T A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC
--CCGATTGGCT-
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC
-NGCCTNAGGCN-
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCCCTTTGGCCC
-TGCCTGAGGCN-
 A C T G A C G T A T G C A G T C G T A C A C G T C G A T C G A T C T A G A C T G G T A C A G T C G T A C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T