Information for 12-TGGCTGGAGGCCG (Motif 18)

C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
Reverse Opposite:
A G T C A C T G A T C G A G T C A G T C C G A T A G T C A G T C C G T A A C T G A G T C A G T C G C T A
p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 19.0bp
Average Position of motif in Background40.7 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGAGGCCG
CTGGCAGNCTGCCA
 A C G T C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTGGAGGCCG--
TTGGCANNNTGCCAAG
 A C G T C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCCG
GGGCGGGAAGG--
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGAGGCCG
TWGTCTGV------
 A C G T C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCCG
GGGCGGGAAGG--
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCCG-
TGGCACCATGCCAA
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGAGGCCG
-NGCTN-------
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGAGGCCG
TGCCCNGGGGCA-
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCCG
TGTCAGGGGGCG-
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGAGGCCG
-NGCCTGAGGCN-
 C A G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A T G C A G T C C T A G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T