Information for 4-CTGGCTGTTTATTTTG (Motif 13)

A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
Reverse Opposite:
A G T C C G T A G C T A C G T A G T C A C G A T C G T A C G T A C G T A A T G C C G T A C T A G A G T C A G T C C G T A T C A G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 21.9bp
Average Position of motif in Background72.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGCTGTTTATTTTG
TTGGCA----------
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
-------TTAATTAN-
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTGGCTGTTTATTTTG
-----TGTTTATTT--
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTGTTTATTTTG
NTTGGCANN--------
 A C G T A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
-TGGCAGTTGN-----
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

PH0054.1_Hoxa7_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG---
--GNNNATTAATTAANNCG
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G C A T G C A T C T G A C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A T C C A G T A G T C A T C G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
---CBTGTTTAYAWW-
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
------NNTAATTANN
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

PRRX1/MA0716.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
-------NTAATTAN-
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGGCTGTTTATTTTG
-------TTAATTAA-
 A G T C A C G T A C T G A C T G A G T C C G A T T A C G C G A T C G A T G C A T C G T A A C G T A C G T C G A T G C A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T