Information for 8-CAAAGTMMWGRCT (Motif 10)

A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G A T A C T G A C T G C T G A G T A C C G A T C G A T A C G T A C T G
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.6 +/- 22.3bp
Average Position of motif in Background58.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTMMWGRCT
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTMMWGRCT
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGTMMWGRCT
GGGGTCAAAGTCCAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAAGTMMWGRCT
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAAGTMMWGRCT
AAAAGTCAA----
 A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTMMWGRCT-
TAAAAATGCTGACTT
 A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGTMMWGRCT
ACAAAG--------
 A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAAGTMMWGRCT
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTMMWGRCT
TCAAGGTCAT----
 A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTMMWGRCT
TCAAGGTCATA---
 A C G T A G T C C G T A C G T A C G T A A C T G A G C T G T A C G T A C C G T A A C T G C T A G A G T C A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T