Information for 3-ACAGGTGCCTTGG (Motif 9)

G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
Reverse Opposite:
A G T C T A G C T C G A C T G A T C A G A C T G T G A C T C G A A T G C A G T C A G C T A C T G C G A T
p-value:1e-11
log p-value:-2.690e+01
Information Content per bp:1.764
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets33.6 +/- 16.0bp
Average Position of motif in Background48.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGTGCCTTGG
GACAGGTGTN----
 A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGTGCCTTGG
NNCAGGTGCG----
 A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGTGCCTTGG
NNCAGGTGTN----
 A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAGGTGCCTTGG
AACAGGTGT-----
 A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGTGCCTTGG
NNCAGGTGNN----
 A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGTGCCTTGG
SDGCAGGTGCNS---
 A C G T A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACAGGTGCCTTGG
NGNGACAGCTGCN----
 A C G T A C G T A C G T A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACAGGTGCCTTGG
NNVVCAGCTGBN----
 A C G T A C G T A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACAGGTGCCTTGG
GAAGAACAGGTGTCCG--
 A C G T A C G T A C G T A C G T A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACAGGTGCCTTGG
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T G C T A A G T C C T G A C T A G A T C G A C G T A C T G G T A C A G T C A G C T A G C T A C T G A C T G
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A