Information for 6-AGCCCCTCCCTGCKGG (Motif 7)

C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
Reverse Opposite:
A G T C T A G C T G C A C T A G A G T C C G T A C T A G A C T G A T C G C G T A A C T G A C T G A T C G C T A G A G T C A G C T
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 19.4bp
Average Position of motif in Background48.0 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AGCCCCTCCCTGCKGG-
-----CCCCCTGCTGTG
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCCCCTCCCTGCKGG--
---GGCCYCCTGCTGDGH
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCCCCTCCCTGCKGG
-GCCCCGCCCC-----
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCCCCTCCCTGCKGG
NRGCCCCRCCCHBNN--
 A C G T C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCCCCTCCCTGCKGG
-GCCCCACCCA-----
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AGCCCCTCCCTGCKGG--
--------CCTGCTGAGH
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCCCCTCCCTGCKGG
-GCCMCRCCCH-----
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCCCCTCCCTGCKGG
KGCCCTTCCCCA----
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCCTCCCTGCKGG
NAGCCCCGCCCCCN---
 A C G T C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCCCCTCCCTGCKGG
GGCCACRCCCMK----
 C T G A C T A G A G T C A T G C A G T C G T A C C G A T A T G C A G T C A G T C A C G T A C T G A G T C A C G T A T C G C T A G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T A C G T