Information for 12-GCAACTCGCA (Motif 49)

A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A
Reverse Opposite:
A G C T T C A G G A T C A T C G G T C A C T A G A G C T A C G T T C A G G T A C
p-value:1e-5
log p-value:-1.223e+01
Information Content per bp:1.725
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.7 +/- 14.1bp
Average Position of motif in Background34.2 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAACTCGCA-----
TCGTACCCGCATCATT
 A C G T A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAACTCGCA--
--TACCCGCATN
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T
A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAACTCGCA-
-TBGCACGCAA
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCAACTCGCA
----CACGCA
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAACTCGCA
GCCACACCCA
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAACTCGCA--
-GTACCCGCATN
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAACTCGCA--
GCCACRCCCACY
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAACTCGCA------
--GCCGCGCAGTGCGT
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCAACTCGCA-
GGCCACRCCCMK
 A C G T A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCAACTCGCA----
---GCTCGTAAAAA
 A C T G A G T C T G C A T C G A A G T C C A G T T A G C C T A G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A