Information for 11-CCTGATCGCT (Motif 47)

A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G C G T A A C G T A G T C C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 12.0bp
Average Position of motif in Background67.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTGATCGCT
-CTAATCGNT
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGATCGCT--
--TAATCGATAA
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGATCGCT--
--TAATCGATAA
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGATCGCT--
--DGATCRATAN
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGATCGCT
-TTGATTGN-
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGATCGCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGATCGCT
YCTTATCWVN
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTGATCGCT
TTCTTATCTGT
 A C G T A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGATCGCT
GTTAATGGCC
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGATCGCT-
TCTTATCTCCC
 A G T C A G T C A C G T A C T G C G T A A C G T A G T C A C T G A G T C A C G T A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C