Information for 24-ATGGTCTCTGCCCYHC (Motif 43)

T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
Reverse Opposite:
C T A G C A G T C T G A C T A G C A T G A T C G A T G C C G T A A C T G C G T A A T C G C G T A A T G C A G T C G T C A A C G T
p-value:1e-7
log p-value:-1.733e+01
Information Content per bp:1.707
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.1 +/- 13.4bp
Average Position of motif in Background51.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC-
-TGGACTTTGNNCTNTG
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
-TGGACTTTGNNCTCN
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
-TGACCTTTGCCCTA-
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
-TGACCTTTGCCCTAN
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGGTCTCTGCCCYHC
-TGACCTTTGCCCCA-
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTCTCTGCCCYHC
ATTGGACTTTGACCCC-
 A C G T T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
NAGGTCANTGACCT--
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
-TGACCTCTGACCCCN
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGTCTCTGCCCYHC
-TGACCTTTGACCTC-
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATGGTCTCTGCCCYHC
-------ATGCCCACC
 T C G A A C G T A C T G A T C G G A C T A T G C G A C T T A G C C G A T A T C G A T G C G T A C A G T C A G C T G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C