Information for 17-TCTCCTAATGCCA (Motif 40)

C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A T G C G T C A C G A T A C G T C G T A A C T G A T C G G C T A C T A G C G T A
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.785
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.5 +/- 27.7bp
Average Position of motif in Background44.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCTCCTAATGCCA
---GCTAATCCCC
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCTCCTAATGCCA
---CTTAATCCC-
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCTCCTAATGCCA
---CCTAATCCGC
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCTCCTAATGCCA
---GCTAATCC--
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCTCCTAATGCCA
----YTAATCCY-
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCTAATGCCA--
GNNAGCTAATCCCCCN
 A C G T C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCTCCTAATGCCA
-----TAATCCCN
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCTCCTAATGCCA
----TTAATCCC-
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTCCTAATGCCA
---NYTAATCCYB
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCTCCTAATGCCA--
----CTAATCCTCTT
 C G A T A G T C C G A T A T G C A G T C G A C T C G T A C G T A C A G T A T C G G T A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T