Information for 21-KSGCCASMAGCYCCTC (Motif 35)

A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C T A G C T A G A C T G A G T C A C G T C A G T T A G C A C G T A C T G A C T G A G T C A T G C G T C A
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.857
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 15.1bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC
ADGGYAGYAGCATCT-
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KSGCCASMAGCYCCTC
-TGCCTGCGYCMCCTT
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC
-CGCCTCAGGCA----
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC-
--GTCWGCTGTYYCTCT
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC
-AGCCTCAGGCA----
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC
-----AGCAGCTGCT-
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:KSGCCASMAGCYCCTC-----
-------NAGCCCCGCCCCCN
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:KSGCCASMAGCYCCTC-
-------AAGACCCYYN
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-KSGCCASMAGCYCCTC
CGTGCCAAG--------
 A C G T A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:KSGCCASMAGCYCCTC
-TGCCAA---------
 A C G T A T C G A C T G A G T C A G T C C G T A A T C G G T C A C G T A C T A G A G T C G A C T A G T C A G T C A C G T A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T