Information for 20-GCAAGCAATGTTGTAA (Motif 34)

A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A G T A C C G T A C G T A A T G C C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 32.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCAAGCAATGTTGTAA
------NATGTTGCAA
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCAATGTTGTAA
TBGCACGCAA--------
 A C G T A C G T A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAAGCAATGTTGTAA
CCAATCAA--------
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCAAGCAATGTTGTAA
ATTTGCATACAATGG-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCAAGCAATGTTGTAA-----
------AGNGTTCTAATGANN
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCAAGCAATGTTGTAA--
----CTAATATTGCTAAA
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCAAGCAATGTTGTAA--
----CTAATATTGCTAAA
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCAAGCAATGTTGTAA-
-------ATGATGCAAT
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCAATGTTGTAA
HNRAATCAAT-------
 A C G T A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCAAGCAATGTTGTAA-----
-----TAAAGTCGTAAAATAG
 A C T G A G T C C G T A C G T A C T A G A G T C C G T A C G T A C G A T A T C G A C G T A C G T A C T G A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G