Information for 15-TCACATKTTAMTK (Motif 33)

A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
Reverse Opposite:
G T A C C G T A A C G T A C G T C G T A C G T A G T A C C G T A A C G T A C T G A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.5 +/- 20.9bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCACATKTTAMTK
GGTCACATGAC----
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCACATKTTAMTK
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCACATKTTAMTK--
----ATATTAATTAA
 A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCACATKTTAMTK
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACATKTTAMTK
GTCACGTGGT----
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCACATKTTAMTK
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCACATKTTAMTK
TTCACACCTT----
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCACATKTTAMTK
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACATKTTAMTK
GTCACATGAY----
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCACATKTTAMTK
NTTTTCACACCTT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T C G T A G T C A A C G T C A T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T