Information for 19-CCACCCAGAAAGCTVT (Motif 32)

A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
Reverse Opposite:
G T C A A C G T C G T A A T C G A G T C C G A T G A C T A G C T A T G C A C G T C T A G C A T G C A T G C A G T A C T G A C T G
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.689
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets32.9 +/- 16.2bp
Average Position of motif in Background56.2 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3/MA0737.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACCCAGAAAGCTVT
GACCCCCCACGAAG----
 A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCACCCAGAAAGCTVT
ATTTCCCAGVAKSCY--
 A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCACCCAGAAAGCTVT
AGACCCCCCACGAAGC---
 A C G T A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCAGAAAGCTVT
GGACCACCCACG-------
 A C G T A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCACCCAGAAAGCTVT-
-TACCCACAATGCATTG
 A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T A C G T
A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCACCCAGAAAGCTVT
GACCCCCCGCGAAG----
 A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CCACCCAGAAAGCTVT
ANNTNCCCACCCANNAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCACCCAGAAAGCTVT
CCACACAGCAGGAGA-
 A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCACCCAGAAAGCTVT
TGGACCAATCAGCACTCT--
 A C G T A C G T A C G T A C G T A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCACCCAGAAAGCTVT
CCACACAGCAGGAGA-
 A G T C T A G C G T C A G A T C G A T C G A T C C G T A A T C G T C G A C T G A C G T A A C T G T A G C C G A T T C G A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T