Information for 13-TGATTACCTAGGC (Motif 29)

A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
Reverse Opposite:
A C T G A T G C A G T C A G C T C T G A A C T G A C T G C G A T C G T A C T G A A C G T A G T C G T C A
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.710
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif61.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.8 +/- 22.9bp
Average Position of motif in Background52.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGATTACCTAGGC
TGTTTACTTAGG-
 A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGATTACCTAGGC--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGATTACCTAGGC
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGATTACCTAGGC
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGATTACCTAGGC
AAGGTAATTACCTAAT-
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGATTACCTAGGC---
--ATTCCCAAGGGAAT
 A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGATTACCTAGGC
NTTAATTACN-----
 A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGATTACCTAGGC
GCGCTATAATTACCGAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGATTACCTAGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGATTACCTAGGC--
-------CTAGGCCT
 A C G T C T A G G T C A G A C T C G A T G C T A G T A C G T A C A G C T C T G A C T A G A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T