Information for 17-CAGGHAGACAACAAAA (Motif 27)

G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G A T A C T G C G A T A G C T C T A G A C G T A T G C A C G T C A G T A G T C A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.770
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 24.9bp
Average Position of motif in Background70.0 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGACAACAAAA
CGAAGCACACAAAATA-
 A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGGHAGACAACAAAA---
----CAAACAACAACACCT
 G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGACAACAAAA
CCAGGAACAG-------
 A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGGHAGACAACAAAA
---BCAGACWA-----
 G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGACAACAAAA
ACAGGAAGTG-------
 A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGACAACAAAA
VCAGGTRDRY-------
 A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGACAACAAAA
ANCAGGAAGT--------
 A C G T A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGACAACAAAA
AVCAGGAAGT--------
 A C G T A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGACAACAAAA
AACAGGAAGT--------
 A C G T A C G T G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGGHAGACAACAAAA-----
-AADGAGVCANYASTACAGNC
 G T A C C G T A C T A G A C T G G C T A C G T A A T C G G T C A G A T C C T G A G C T A G T A C C G T A T G C A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C