Information for 11-GCCTCCATTGAVGGGC (Motif 16)

C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C G A T C A C T G C G A T A T G C C G T A C T G A C G A T A C T G A C T G C G T A C T A G A C T G A G T C
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 22.9bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCATTGAVGGGC
NNCATTCATTCATNNN-
 A C G T C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCCTCCATTGAVGGGC-------
------NNTNNGGGGCGGNGNGN
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCCTCCATTGAVGGGC
---CTCATTGTC----
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCATTGAVGGGC
GTCCGCCATTA------
 A C G T C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCATTGAVGGGC
TGTTCCCATTGTGTACT
 A C G T C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCCTCCATTGAVGGGC----
GCCTCCTCCMTCWGACTGKS
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GCCTCCATTGAVGGGC
----CCATTGTTYB--
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.47
Offset:4
Orientation:forward strand
Alignment:GCCTCCATTGAVGGGC
----CCTTTGTT----
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:GCCTCCATTGAVGGGC------
------NNNNTTGGGCACNNCN
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:GCCTCCATTGAVGGGC--
---------TNNGGGCAG
 C T A G A G T C A G T C A C G T G T A C A G T C C G T A A G C T A C G T A T C G C G T A T A G C C A T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G