Information for 23-GGCAAGAGCTCTGAAG (Motif 38)

A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.086e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 11.4bp
Average Position of motif in Background37.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCAAGAGCTCTGAAG
AAGGCAAGTGT-------
 A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGCAAGAGCTCTGAAG
-----TAGGTGTGAAG
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GGCAAGAGCTCTGAAG
-GCAACAGCTGTTGT-
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GGCAAGAGCTCTGAAG-
-------CCTTTGATGT
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GGCAAGAGCTCTGAAG
--CAAGACGCCTTA--
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GGCAAGAGCTCTGAAG
GAGGTCAAAAGGTCA----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GGCAAGAGCTCTGAAG
-----AGCCACTCAAG
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGCAAGAGCTCTGAAG
GGGRAARRGRMCAGMTG
 A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GGCAAGAGCTCTGAAG-
-------CCTTTGAWGT
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GGCAAGAGCTCTGAAG
-----AAGGTGTGAA-
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T