p-value: | 1e-6 |
log p-value: | -1.438e+01 |
Information Content per bp: | 1.933 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 21.5 +/- 6.2bp |
Average Position of motif in Background | 51.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Arid3b/MA0601.1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TATTAATCTGGAA NTAATTAATAT---- |
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OTX2/MA0712.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TATTAATCTGGAA --TTAATCCT--- |
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OTX1/MA0711.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TATTAATCTGGAA --TTAATCCG--- |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TATTAATCTGGAA- GNNNATTAATCCCTNCN |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TATTAATCTGGAA --YTAATCCY--- |
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Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TATTAATCTGGAA-- --TTAATGTTTAACC |
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PH0130.1_Otx2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TATTAATCTGGAA- GANNATTAATCCCTNNN |
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PH0129.1_Otx1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TATTAATCTGGAA- NNNAATTAATCCCCNCN |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TATTAATCTGGAA- ----GGTCTGGCAT |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TATTAATCTGGAA TCATCAATCA---- |
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