Information for 5-NTGAMCTTTG (Motif 3)

G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G
Reverse Opposite:
T A G C C G T A C T G A C T G A A C T G C A T G G C A T A G T C G T C A C T G A
p-value:1e-24
log p-value:-5.596e+01
Information Content per bp:1.543
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif10.73%
Number of Background Sequences with motif1266.2
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets48.2 +/- 26.3bp
Average Position of motif in Background50.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:NTGAMCTTTG
CTGACCTTTG
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:NTGAMCTTTG------
-TGGACTTTGNNCTCN
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---NTGAMCTTTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---NTGAMCTTTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:NTGAMCTTTG-------
-TGGACTTTGNNCTNTG
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---NTGAMCTTTG
CNNTTGACCTTTG
 A C G T A C G T A C G T G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:NTGAMCTTTG---
-TGACCTTTNCNT
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:NTGAMCTTTG------
-TGACCTTTGCCCTAN
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.76
Offset:1
Orientation:forward strand
Alignment:NTGAMCTTTG-----
-TGACCTTTGCCCCA
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:NTGAMCTTTG-----
-TGACCTTTGCCCTA
 G A C T C A G T T C A G C G T A G T A C A G T C A G C T G A C T G C A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A