Information for 8-VARCAGGTWTATYTGC (Motif 11)

T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
Reverse Opposite:
A T C G A G T C C G T A C T A G C G T A C G A T C G T A C G T A C G T A G T A C A G T C C A G T A T C G G A C T C G A T A G C T
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.650
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif70.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.0 +/- 22.8bp
Average Position of motif in Background47.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-VARCAGGTWTATYTGC
AAAACCGGTTTT-----
 A C G T T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:VARCAGGTWTATYTGC
AAACCGGTTT------
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:VARCAGGTWTATYTGC
-AACAGGTGT------
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:VARCAGGTWTATYTGC
--VCAGGTRDRY----
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---VARCAGGTWTATYTGC
GAGCAACAGGTGGTT----
 A C G T A C G T A C G T T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---VARCAGGTWTATYTGC
ATGCAACAGGTGG------
 A C G T A C G T A C G T T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:VARCAGGTWTATYTGC----
AAACYKGTTWDACMRGTTTB
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:VARCAGGTWTATYTGC
-AACAGGTGNT-----
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:VARCAGGTWTATYTGC
-GACAGGTGTN-----
 T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---VARCAGGTWTATYTGC
GAAGAACAGGTGTCCG---
 A C G T A C G T A C G T T C G A G C T A C T G A T A G C G T C A T C A G A C T G A C G T G C A T C G A T G C T A G C A T A G T C C G A T C T A G T A G C
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T