Information for 16-TGGCTDGACTTCAAAG (Motif 27)

C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G
Reverse Opposite:
A G T C A G C T A C G T C G A T C A T G T C G A C G T A T A C G G A C T G T A C G A T C G T C A A C T G A T G C G T A C G C T A
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.690
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets39.2 +/- 25.4bp
Average Position of motif in Background46.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:7
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG-
-------ACATCAAAGG
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.67
Offset:7
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG-
-------ACWTCAAAGG
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG---
-----AAAGATCAAAGGAA
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG
-----CGGTTTCAAA-
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G
A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG---
-------ACATCAAAGGNA
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG-----
----TATAGATCAAAGGAAAA
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCTDGACTTCAAAG-----
----TATAGATCAAAGGAAAA
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGGCTDGACTTCAAAG
-------NATTCAAAT
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGCTDGACTTCAAAG-----
----NNNAGATCAAAGGANNN
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGCTDGACTTCAAAG-----
----NANAGATCAAAGGGNNN
 C G A T A C T G T A C G T A G C C A G T C A T G C A T G C G T A A G T C A C G T A C G T G T A C C G T A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T