Information for 18-CTCTGCRAGC (Motif 25)

A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A G C T A C T G A T G C C G T A A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.893
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif61.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.4 +/- 24.7bp
Average Position of motif in Background46.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGCRAGC--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGCRAGC
DCTCAGCAGG-
 A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCRAGC-----
ACTATGCCAACCTACC
 A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCTGCRAGC-
--ATGCCAACC
 A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTGCRAGC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTGCRAGC
AAATCACTGC----
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCRAGC-
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTCTGCRAGC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCTGCRAGC
--TTGCCAAG
 A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCRAGC
ATGACTCAGCAD--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A T C G A G T C C T G A C G T A T A C G A G T C
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T