Information for 15-AAGGTAGCCCATT (Motif 24)

C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C T G A C T G A G T C C G A T C G T A A T G C A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 22.1bp
Average Position of motif in Background46.3 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAGGTAGCCCATT
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGGTAGCCCATT
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGGTAGCCCATT-------
---TGTTCCCATTGTGTACT
 C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAGGTAGCCCATT
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AAGGTAGCCCATT---
------GGCCATTAAC
 C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAGGTAGCCCATT
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAGGTAGCCCATT--
-----AGCTCATTAT
 C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGGTAGCCCATT--
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTAGCCCATT---
NNNTCCATCCCATAANN
 A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTAGCCCATT--
NNNNGGTACCCCCCANN
 A C G T A C G T C G T A C G T A A C T G A T C G A C G T C G T A A C T G A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C