Information for 12-CTTCCCAGRCTRGCTA (Motif 20)

A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
Reverse Opposite:
C A G T C T G A A C T G A T G C G A C T C G T A A C T G A G T C A G T C A C G T A C T G A C T G C T A G G T C A C T G A T C A G
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.5 +/- 18.1bp
Average Position of motif in Background38.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA-
--TCCCAGMCRAGCCCC
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
-TGCCCAGNHW-----
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCAGRCTRGCTA
HTTTCCCASG-------
 A C G T A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
----CCAGACAG----
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
----CCAGACRSVB--
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
----BCAGACWA----
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
ATGCCCGGGCATGT--
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTCCCAGRCTRGCTA
-ATGCCAGACN-----
 A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCAGRCTRGCTA
CAAATCCAGACATCACA
 A C G T A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCAGRCTRGCTA
ATTTCCCAGVAKSCY--
 A C G T A G T C A G C T A C G T A G T C G T A C A G T C C G T A C T A G C T A G A G T C C G A T C T A G A T C G A G T C A G C T G T C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T