Information for 10-SCAAGAGCWCTGAAGC (Motif 17)

T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
Reverse Opposite:
T A C G G T A C A G C T A C G T G T A C T C G A C A T G G C T A T C A G A G T C C G A T A G T C A C G T C G A T C T A G A T G C
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.689
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 31.3bp
Average Position of motif in Background43.7 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC
-CAAGACGCCTTA---
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC
----AAGCACTTAA--
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:SCAAGAGCWCTGAAGC
----------NGAAGC
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-SCAAGAGCWCTGAAGC
NNNNTGAGCACTGTNNG
 A C G T T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.48
Offset:5
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC
-----RSCACTYRAG-
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC
CCATGTGCTT------
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC---
--ACAAGCAATTAATGAAT
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:SCAAGAGCWCTGAAGC---
--ACAAGCAATTAATGAAT
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--SCAAGAGCWCTGAAGC
SDGCAGGTGCNS------
 A C G T A C G T T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:SCAAGAGCWCTGAAGC
CCACGTGGNN------
 T A C G A G T C C G T A T C G A C T A G C G T A C T A G A G T C C G A T G A T C A C G T C A T G G T C A C T G A A C T G A G T C
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T