Information for 9-GKGARTTCCASCA (Motif 15)

A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C A C G T A C T G A C T G C T G A C T G A A G C T A C G T A G T C G T A C A G T C
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.6 +/- 23.3bp
Average Position of motif in Background41.7 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GKGARTTCCASCA
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GKGARTTCCASCA
NGGGGATTTCCC---
 A C G T A C G T A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GKGARTTCCASCA
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GKGARTTCCASCA
GGGAATTTCC----
 A C G T A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GKGARTTCCASCA
GGGGATTCCCCC-
 A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GKGARTTCCASCA
--GCATTCCAGN-
 A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GKGARTTCCASCA-
----ATTGCATCAT
 A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GKGARTTCCASCA-
----ATTGCATCAK
 A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GKGARTTCCASCA
GGGAATTTCC----
 A C G T A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GKGARTTCCASCA
--RCATTCCWGG-
 A C T G A C T G A C T G C G T A T C A G A G C T A G C T A G T C A G T C C G T A A T C G A G T C C G T A
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T