Information for 4-GKMCARKCCTYWGWWW (Motif 7)

A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
Reverse Opposite:
C G T A C G A T G C A T A G T C C G A T C T G A C G T A A C T G A C T G T G C A A G T C A C G T A C T G A C T G G T C A T A G C
p-value:1e-13
log p-value:-3.023e+01
Information Content per bp:1.779
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 16.8bp
Average Position of motif in Background21.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GKMCARKCCTYWGWWW
NNGGCCACGCCTTTN---
 A C G T A C G T A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GKMCARKCCTYWGWWW
--CNAGGCCT------
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GKMCARKCCTYWGWWW
--CTAGGCCT------
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GKMCARKCCTYWGWWW
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GKMCARKCCTYWGWWW
-------CCTTTGTT-
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GKMCARKCCTYWGWWW----
----ANTCCTTTGTCTNNNN
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GKMCARKCCTYWGWWW
CGAACAGTGCTCACTAT
 A C G T A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GKMCARKCCTYWGWWW-
-------CCTTTGTTTT
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GKMCARKCCTYWGWWW-
-------CCTTTGATGT
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GKMCARKCCTYWGWWW----
---TNNTCCTTTGTTCTNNT
 A C T G A C G T G T A C A G T C C G T A C T A G A C G T A G T C G T A C A C G T A G C T C G T A A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T