Information for 20-ACAGGCAAAACAGGRA (Motif 36)

C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
Reverse Opposite:
C A G T A G C T A G T C G T A C C G A T T A C G A C G T C G A T C G A T C G A T A T C G A G T C A G T C A G C T A C T G A G C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.7 +/- 20.4bp
Average Position of motif in Background55.6 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCAAAACAGGRA
CACAGN-----------
 A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACAGGCAAAACAGGRA--
----GCAAAACATTACTA
 C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCAAAACAGGRA
NACAGGAAAT-------
 A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCAAAACAGGRA
NACAGGAAAT-------
 A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ACAGGCAAAACAGGRA--
--------AACAGGAAGT
 C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACAGGCAAAACAGGRA
ACAGGAAGTG------
 C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACAGGCAAAACAGGRA
TBGCACGCAA--------
 A C G T A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACAGGCAAAACAGGRA
BCAGACWA--------
 C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACAGGCAAAACAGGRA-
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----ACAGGCAAAACAGGRA
CAAATCCAGACATCACA----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C T G A A C T G C T A G A T G C C G T A C G T A G C T A C G T A A G T C C G T A A C T G T A C G T C G A G T C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T