Information for 20-TGCCAAGTGTGTG (Motif 34)

A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
Reverse Opposite:
A T G C C G T A A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 15.2bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGTGTGTG
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGTGTGTG
TTGCCAAG------
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGTGTGTG
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGTGTGTG
TGCCAA-------
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCCAAGTGTGTG
-GCCACGTGT---
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCCAAGTGTGTG
-GCCACGTG----
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGTGTGTG
ATGCCAACC-----
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCCAAGTGTGTG
-KCCACGTGAC--
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCCAAGTGTGTG
---CAGGTGAGG-
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCCAAGTGTGTG
-GGCACGTGTC--
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A T C G C G A T A C T G C G A T A T C G
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T