Information for 11-TGGCTGGTGA (Motif 28)

A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
Reverse Opposite:
C A G T A G T C C T G A A T G C A G T C C G T A C T A G A T G C G T A C C G T A
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.846
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif182.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets40.8 +/- 28.2bp
Average Position of motif in Background50.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGTGA
TWGTCTGV---
 A C G T A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCTGGTGA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGTGA
CTGTCTGG---
 A C G T A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGGTGA
CGTGGGTGGTCC
 A C G T A C G T A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGTGA
-NGCTN----
 A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGTGA--
SDGCAGGTGCNS
 A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGTGA-
-NNCAGGTGNN
 A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGTGA
TTGGCA-----
 A C G T A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGTGA-
-GACAGGTGTN
 A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGGCTGGTGA--
---CAGGTGAGG
 A C G T A C T G A T C G A G T C C G A T A C T G A T C G G A C T C T A G G T C A A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G