Information for 13-CHCCACCDAATCAGAC (Motif 21)

A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
Reverse Opposite:
C T A G G A C T G T A C A C G T C T A G C G T A A C G T A C G T G C T A A T C G C T A G A C G T A C T G A C T G C G T A A T C G
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.778
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 25.9bp
Average Position of motif in Background23.7 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUXA/MA0884.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
-CTAATTTAATCAA--
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
ATCCAC----------
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CHCCACCDAATCAGAC
GCGACCACCGAA------
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC---
--CGACCCAATCAACGGTG
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CHCCACCDAATCAGAC
GCGACCACCGAA------
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CHCCACCDAATCAGAC
CTTAACCACTTAAGGAT--
 A C G T A C G T A C G T A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
------CTAATTAG--
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G A C G T A C G T

EN1/MA0027.2/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
------CTAATTAG--
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
----ADBTAATTAR--
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G A C G T A C G T

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CHCCACCDAATCAGAC
------CTAATTAG--
 A T G C G A C T A G T C A G T C C G T A A G T C T A G C C A G T C G T A C G T A C G A T A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T