Information for 2-AAGTYCAAAGTTC (Motif 2)

T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C
Reverse Opposite:
T C A G G T C A T G C A G T A C A C G T G A C T G A C T A C T G T C G A T G C A T A G C G A C T A C G T
p-value:1e-23
log p-value:-5.337e+01
Information Content per bp:1.694
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif133.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets43.4 +/- 25.5bp
Average Position of motif in Background47.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AAGTYCAAAGTTC-
AGAGTCCAAAGTCCA
 A C G T T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AAGTYCAAAGTTC-
CANAGNNCAAAGTCCA
 A C G T A C G T T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAGTYCAAAGTTC
-ACATCAAAGG--
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGTYCAAAGTTC-
GAGGTCAAAGGTCA
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGTYCAAAGTTC-
GGGGTCAAAGGTCA
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAGTYCAAAGTTC-
GGGGTCAAAGGTCA
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAGTYCAAAGTTC
-ACWTCAAAGG--
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGTYCAAAGTTC-
GGGGTCAAAGGTCA
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGTYCAAAGTTC-
GAGGTCAAAGGTCA
 T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAGTYCAAAGTTC---
AAAGGTCAAAGGTCAAC
 A C G T T G C A C T G A A T C G A C G T A G C T A G T C C G T A C G T A C G T A A C T G A C G T C A G T A G T C A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C