Information for 8-CTCCCYCTGSTGGCAR (Motif 12)

A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
Reverse Opposite:
A G T C G A C T A T C G A T G C A G T C G T C A A T G C A G T C C G T A C T A G C T G A C T A G C T A G A C T G G T C A A C T G
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.751
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.0 +/- 28.9bp
Average Position of motif in Background47.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------CTCCCYCTGSTGGCAR
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCYCTGSTGGCAR
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTCCCYCTGSTGGCAR
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCCCYCTGSTGGCAR
--CCCCCTGCTGTG--
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCCCYCTGSTGGCAR
CACCCCCGGGGGGG--
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCCYCTGSTGGCAR
CCCCCCCGGGGGGGT-
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCCYCTGSTGGCAR
GGCCYCCTGCTGDGH-
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCCYCTGSTGGCAR
CCCCCCCGGGGGGGT-
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCCCYCTGSTGGCAR
--TCCCCTGGGGAC--
 A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCYCTGSTGGCAR
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C G A T C A G C T A G T C C G A T A C T G A T C G A C G T A C T G A T C G T A G C C T G A C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T