Information for 7-GSSKCYSRGMTGMKSY (Motif 9)

A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
Reverse Opposite:
C T A G A T G C G T C A A C T G A G T C G T C A A C G T A G T C A G C T A T C G C T G A A C T G G T A C T A C G A T C G A G T C
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 22.0bp
Average Position of motif in Background50.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GSSKCYSRGMTGMKSY
----CGCAGCTGCG--
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GSSKCYSRGMTGMKSY
-----HCAGCTGDTN-
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GSSKCYSRGMTGMKSY
------CAGCTGNT--
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GSSKCYSRGMTGMKSY
--NNVVCAGCTGBN--
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GSSKCYSRGMTGMKSY
----TCCAGATGTT--
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GSSKCYSRGMTGMKSY
-----NCAGCTGCTG-
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GSSKCYSRGMTGMKSY
-----CCAGCTGTTN-
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GSSKCYSRGMTGMKSY--
-CTCAGCAGCTGCTACTG
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GSSKCYSRGMTGMKSY
------CAGCTGTT--
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GSSKCYSRGMTGMKSY
GGCCYCCTGCTGDGH-
 A C T G A T G C A T G C A C T G A G T C A G C T A T G C C T G A C T A G G T A C A C G T A C T G G T A C A C G T A T C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T